RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g14270.3 View Network Show in Genome Browser |
| Other Names | Os07g0246200 |
| Description | calreticulin precursor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 8136965-8141282 Nucleotide Length: 1275 |
| Protein-coding | LOC_Os07g14270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02410 LOC_Os02g08180 LOC_Os06g39260 LOC_Os05g44360 LOC_Os05g06440 LOC_Os01g38510 LOC_Os02g48110 LOC_Os03g53800 LOC_Os06g49480 LOC_Os03g01180 LOC_Os06g05740 More.. |
| Downstream Genes | LOC_Os11g09280 LOC_Os08g17680 LOC_Os09g27830 LOC_Os09g19734 LOC_Os07g42960 LOC_Os11g37920 LOC_Os09g32526 LOC_Os09g29460 LOC_Os08g37580 LOC_Os07g48244 LOC_Os07g38930 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g14270.3 |
| Rice Genome Annotation | LOC_Os07g14270.3 |
| Ricechip | LOC_Os07g14270.3 |
| KEGG | osa:4342826 dosa:Os07t0246200-03 |
| Entrez-Gene | 4342826 |