RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g14850.1 View Network Show in Genome Browser |
| Other Names | Os07g0252400 |
| Description | CESA6 - cellulose synthase, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 8496189-8501906 Nucleotide Length: 3279 |
| Protein-coding | LOC_Os07g14850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g42020 LOC_Os05g08370 LOC_Os05g32110 LOC_Os03g49600 LOC_Os04g59330 LOC_Os05g45210 LOC_Os07g10770 LOC_Os06g03640 LOC_Os05g03174 LOC_Os04g42620 LOC_Os03g12250 More.. |
| Downstream Genes | LOC_Os08g06380 LOC_Os12g25690 LOC_Os08g35710 LOC_Os12g01560 LOC_Os11g01570 LOC_Os08g28730 LOC_Os09g35630 LOC_Os07g44070 LOC_Os09g32080 LOC_Os11g03160 LOC_Os08g23180 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 |
| Metacyc Pathways | PWY-1001 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g14850.1 |
| Rice Genome Annotation | LOC_Os07g14850.1 |
| Ricechip | LOC_Os07g14850.1 |
| KEGG | osa:4342850 dosa:Os07t0252400-01 |
| Entrez-Gene | 4342850 |