RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g16970.2 View Network Show in Genome Browser |
| Other Names | Os07g0271000 |
| Description | rab GDP dissociation inhibitor alpha, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 9982582-9988552 Nucleotide Length: 1056 |
| Protein-coding | LOC_Os07g16970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g09140 LOC_Os03g46390 LOC_Os06g35814 LOC_Os07g09680 LOC_Os01g37800 LOC_Os05g44070 LOC_Os01g54590 LOC_Os01g12730 LOC_Os05g48980 LOC_Os01g08450 LOC_Os02g43690 More.. |
| Downstream Genes | LOC_Os07g31370 LOC_Os12g43550 LOC_Os09g15790 LOC_Os12g40710 LOC_Os12g40730 LOC_Os10g39620 LOC_Os11g36440 LOC_Os11g01610 LOC_Os12g40590 LOC_Os12g01690 LOC_Os12g13590 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g16970.2 |
| Rice Genome Annotation | LOC_Os07g16970.2 |
| Ricechip | LOC_Os07g16970.2 |
| KEGG | osa:4342895 dosa:Os07t0271000-01 |
| Entrez-Gene | 4342895 |