RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g18050.1 View Network Show in Genome Browser |
| Other Names | Os07g0281000 |
| Description | RNA-binding motif protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 10678642-10683111 Nucleotide Length: 1461 |
| Protein-coding | LOC_Os07g18050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g30430 LOC_Os02g39720 LOC_Os04g32340 LOC_Os03g61110 LOC_Os03g21140 LOC_Os02g14780 LOC_Os02g29480 LOC_Os06g11370 LOC_Os06g08840 LOC_Os06g04660 LOC_Os02g54770 More.. |
| Downstream Genes | LOC_Os09g38790 LOC_Os12g40190 LOC_Os10g37630 LOC_Os09g13740 LOC_Os10g35580 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g18050.1 |
| Rice Genome Annotation | LOC_Os07g18050.1 |
| Ricechip | LOC_Os07g18050.1 |
| KEGG | osa:4342926 dosa:Os07t0281000-01 |
| Entrez-Gene | 4342926 |