RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g18720.1 View Network Show in Genome Browser |
| Other Names | Os07g0287100 |
| Description | tetratricopeptide repeat containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 11064790-11076993 Nucleotide Length: 1452 |
| Protein-coding | LOC_Os07g18720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59510 LOC_Os02g02520 LOC_Os01g48690 LOC_Os05g35540 LOC_Os02g02390 LOC_Os04g51792 LOC_Os04g42870 LOC_Os01g01302 LOC_Os01g07090 LOC_Os01g16980 LOC_Os02g04460 More.. |
| Downstream Genes | LOC_Os10g32400 LOC_Os10g32348 LOC_Os10g32300 LOC_Os11g11000 LOC_Os07g37840 LOC_Os07g37830 LOC_Os08g44290 LOC_Os10g10170 LOC_Os08g40090 LOC_Os12g13460 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g18720.1 |
| Rice Genome Annotation | LOC_Os07g18720.1 |
| Ricechip | LOC_Os07g18720.1 |
| KEGG | osa:4342939 dosa:Os07t0287100-01 |
| Entrez-Gene | 4342939 |