RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g19060.1 View Network Show in Genome Browser |
| Other Names | Os07g0291100 |
| Description | transport protein particle component, Bet3, domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 11280303-11285325 Nucleotide Length: 528 |
| Protein-coding | LOC_Os07g19060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g28400 LOC_Os01g51220 LOC_Os06g05804 LOC_Os02g40000 LOC_Os04g42500 LOC_Os07g05580 LOC_Os02g57100 LOC_Os07g12650 LOC_Os01g37800 LOC_Os06g35814 LOC_Os03g30460 More.. |
| Downstream Genes | LOC_Os07g44790 LOC_Os07g27150 LOC_Os11g10420 LOC_Os11g14220 LOC_Os08g15040 LOC_Os09g15790 LOC_Os10g34680 LOC_Os07g38730 LOC_Os12g43363 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g19060.1 |
| Rice Genome Annotation | LOC_Os07g19060.1 |
| Ricechip | LOC_Os07g19060.1 |
| KEGG | osa:4342949 dosa:Os07t0291100-01 |
| Entrez-Gene | 4342949 |