RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g20150.1 View Network Show in Genome Browser |
| Other Names | Os07g0297300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 11632040-11636658 Nucleotide Length: 1425 |
| Protein-coding | LOC_Os07g20150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g24612 LOC_Os03g55930 LOC_Os05g05560 LOC_Os07g20140 LOC_Os06g05900 LOC_Os02g51490 LOC_Os07g10250 LOC_Os07g10600 LOC_Os03g15700 LOC_Os03g59050 LOC_Os03g36780 More.. |
| Downstream Genes | LOC_Os12g10580 LOC_Os12g34550 LOC_Os08g27090 LOC_Os08g40610 LOC_Os07g23169 LOC_Os12g16350 LOC_Os09g32274 LOC_Os07g47500 LOC_Os12g10200 LOC_Os11g35340 LOC_Os11g38670 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g20150.1 |
| Rice Genome Annotation | LOC_Os07g20150.1 |
| Ricechip | LOC_Os07g20150.1 |
| KEGG | osa:4342969 dosa:Os07t0297300-00 |
| Entrez-Gene | 4342969 |