RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g20580.1 View Network Show in Genome Browser |
| Other Names | Os07g0301200 |
| Description | DEAD-box ATP-dependent RNA helicase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 11887123-11894422 Nucleotide Length: 1539 |
| Protein-coding | LOC_Os07g20580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g49210 LOC_Os04g43140 LOC_Os03g22880 LOC_Os03g51900 LOC_Os03g19960 LOC_Os03g25450 LOC_Os05g48422 LOC_Os02g37870 LOC_Os01g33030 LOC_Os01g33050 LOC_Os03g63730 More.. |
| Downstream Genes | LOC_Os07g29320 LOC_Os10g35280 LOC_Os07g34740 LOC_Os12g04010 LOC_Os11g04200 LOC_Os07g47580 LOC_Os11g01420 LOC_Os10g31520 LOC_Os09g18320 LOC_Os12g01430 LOC_Os08g31810 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn00680 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g20580.1 |
| Rice Genome Annotation | LOC_Os07g20580.1 |
| Ricechip | LOC_Os07g20580.1 |
| KEGG | osa:4342981 dosa:Os07t0301200-01 |
| Entrez-Gene | 4342981 |