RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g22400.1 View Network Show in Genome Browser |
| Other Names | Os07g0406800 |
| Description | POLA3 - Putative DNA polymerase alpha complex subunit, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 12574580-12579665 Nucleotide Length: 1392 |
| Protein-coding | LOC_Os07g22400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g46270 LOC_Os05g29010 LOC_Os05g39850 LOC_Os02g56130 LOC_Os05g14590 LOC_Os02g30800 LOC_Os01g64820 LOC_Os03g02680 LOC_Os06g08790 LOC_Os01g36390 LOC_Os03g55200 More.. |
| Downstream Genes | LOC_Os12g31810 LOC_Os12g13950 LOC_Os11g36390 LOC_Os12g07720 LOC_Os11g29380 LOC_Os11g08330 LOC_Os12g37400 LOC_Os12g03130 LOC_Os11g03430 LOC_Os10g26280 LOC_Os07g43540 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g22400.1 |
| Rice Genome Annotation | LOC_Os07g22400.1 |
| Ricechip | LOC_Os07g22400.1 |
| KEGG | osa:4342990 dosa:Os07t0406800-01 |
| Entrez-Gene | 4342990 |