RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g22640.1 View Network Show in Genome Browser |
| Other Names | Os07g0409100 |
| Description | lipid binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 12747509-12760678 Nucleotide Length: 1548 |
| Protein-coding | LOC_Os07g22640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0009606 | tropism | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28950 LOC_Os03g45170 LOC_Os03g42770 LOC_Os04g55220 LOC_Os02g10740 LOC_Os02g25060 LOC_Os01g72940 |
| Downstream Genes | LOC_Os12g42850 LOC_Os10g30090 LOC_Os11g32240 LOC_Os09g36770 LOC_Os09g34970 LOC_Os07g24190 LOC_Os11g07500 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g22640.1 |
| Rice Genome Annotation | LOC_Os07g22640.1 |
| Ricechip | LOC_Os07g22640.1 |
| KEGG | osa:4342997 dosa:Os07t0409100-01 |
| Entrez-Gene | 4342997 |