RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g22700.1 View Network Show in Genome Browser |
| Other Names | Os07g0409700 |
| Description | tim44-like domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 12783971-12790416 Nucleotide Length: 1428 |
| Protein-coding | LOC_Os07g22700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02390 LOC_Os03g30200 LOC_Os07g09450 LOC_Os01g06454 LOC_Os01g21610 LOC_Os05g43770 LOC_Os01g55700 LOC_Os03g22880 LOC_Os03g02710 LOC_Os02g46990 LOC_Os02g53420 More.. |
| Downstream Genes | LOC_Os08g25090 LOC_Os07g45300 LOC_Os07g41330 LOC_Os09g11250 LOC_Os10g37530 LOC_Os08g31810 LOC_Os09g34960 LOC_Os10g33910 LOC_Os08g43170 LOC_Os09g31486 LOC_Os12g27070 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g22700.1 |
| Rice Genome Annotation | LOC_Os07g22700.1 |
| Ricechip | LOC_Os07g22700.1 |
| KEGG | osa:4343001 dosa:Os07t0409700-01 |
| Entrez-Gene | 4343001 |