RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g23110.1 View Network Show in Genome Browser |
| Other Names | Os07g0413700 |
| Description | poly synthetase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 13026440-13037161 Nucleotide Length: 2934 |
| Protein-coding | LOC_Os07g23110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g14670 LOC_Os03g63920 LOC_Os05g38150 LOC_Os02g56130 LOC_Os03g18210 LOC_Os06g05190 LOC_Os01g71256 LOC_Os04g52960 LOC_Os04g43300 LOC_Os03g33580 LOC_Os07g08729 More.. |
| Downstream Genes | LOC_Os08g10649 LOC_Os11g08660 LOC_Os07g49010 LOC_Os08g31930 LOC_Os08g05840 LOC_Os09g23620 LOC_Os08g33150 LOC_Os09g36250 LOC_Os12g08070 LOC_Os07g39950 LOC_Os12g21798 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g23110.1 |
| Rice Genome Annotation | LOC_Os07g23110.1 |
| Ricechip | LOC_Os07g23110.1 |
| KEGG | osa:4343013 dosa:Os07t0413700-01 |
| Entrez-Gene | 4343013 |