RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g24190.1 View Network Show in Genome Browser |
| Other Names | Os07g0424400 |
| Description | CESA3 - cellulose synthase, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 13741284-13747256 Nucleotide Length: 3282 |
| Protein-coding | LOC_Os07g24190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32110 LOC_Os03g52630 LOC_Os07g10770 LOC_Os06g03640 LOC_Os05g32500 LOC_Os04g59330 LOC_Os01g16030 LOC_Os05g08370 LOC_Os07g22640 LOC_Os02g52500 LOC_Os06g42020 More.. |
| Downstream Genes | LOC_Os09g32080 LOC_Os09g36800 LOC_Os07g27810 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5817 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 |
| Metacyc Pathways | PWY-1001 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g24190.1 |
| Rice Genome Annotation | LOC_Os07g24190.1 |
| Ricechip | LOC_Os07g24190.1 |
| KEGG | osa:4343049 dosa:Os07t0424400-01 |
| Entrez-Gene | 4343049 |