RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g27140.1 View Network Show in Genome Browser |
| Other Names | Os07g0454400 |
| Description | AT hook motif family protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 15732601-15746265 Nucleotide Length: 3030 |
| Protein-coding | LOC_Os07g27140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g21580 LOC_Os02g48600 LOC_Os02g57820 LOC_Os05g51850 |
| Downstream Genes | LOC_Os08g37270 LOC_Os08g40150 LOC_Os09g23730 LOC_Os12g42970 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g27140.1 |
| Rice Genome Annotation | LOC_Os07g27140.1 |
| Ricechip | LOC_Os07g27140.1 |
| KEGG | osa:9269796 dosa:Os07t0454400-01 |
| Entrez-Gene | 9269796 |