RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g27150.2 View Network Show in Genome Browser |
| Other Names | Os07g0454700 |
| Description | trafficking protein particle complex subunit 4, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 15751055-15755972 Nucleotide Length: 432 |
| Protein-coding | LOC_Os07g27150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g19060 LOC_Os03g28400 LOC_Os01g51220 LOC_Os02g40000 LOC_Os04g42500 LOC_Os07g05580 LOC_Os07g12650 LOC_Os03g51600 LOC_Os06g08380 LOC_Os01g55040 LOC_Os04g53240 More.. |
| Downstream Genes | LOC_Os09g06970 LOC_Os07g44790 LOC_Os11g14220 LOC_Os07g38730 LOC_Os08g09240 LOC_Os08g13690 LOC_Os07g32800 LOC_Os11g04070 LOC_Os12g03880 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g27150.2 |
| Rice Genome Annotation | LOC_Os07g27150.2 |
| Ricechip | LOC_Os07g27150.2 |
| KEGG | osa:4343141 dosa:Os07t0454700-01 |
| Entrez-Gene | 4343141 |