RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g27180.1 View Network Show in Genome Browser |
| Other Names | Os07g0455100 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 15768892-15787357 Nucleotide Length: 2757 |
| Protein-coding | LOC_Os07g27180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43020 LOC_Os05g27870 LOC_Os03g50010 LOC_Os02g51730 LOC_Os07g06710 LOC_Os04g59394 LOC_Os03g22140 LOC_Os03g19200 LOC_Os01g42960 LOC_Os05g31062 LOC_Os03g13370 More.. |
| Downstream Genes | LOC_Os10g34540 LOC_Os12g41190 LOC_Os10g32300 LOC_Os09g36740 LOC_Os07g49000 LOC_Os07g29360 LOC_Os11g05090 LOC_Os08g41390 LOC_Os10g36250 LOC_Os08g39080 LOC_Os12g05090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g27180.1 |
| Rice Genome Annotation | LOC_Os07g27180.1 |
| Ricechip | LOC_Os07g27180.1 |
| KEGG | osa:4343142 dosa:Os07t0455100-00 |
| Entrez-Gene | 4343142 |