RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g27450.1 View Network Show in Genome Browser |
| Other Names | Os07g0458700 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 15990882-15994107 Nucleotide Length: 501 |
| Protein-coding | LOC_Os07g27450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g06510 LOC_Os06g06460 LOC_Os05g36280 LOC_Os04g34240 LOC_Os01g64640 LOC_Os03g27290 LOC_Os07g10830 LOC_Os03g36730 LOC_Os02g08180 LOC_Os02g27760 LOC_Os02g07870 More.. |
| Downstream Genes | LOC_Os11g05730 LOC_Os08g28730 LOC_Os07g38930 LOC_Os09g36976 LOC_Os10g41410 LOC_Os09g17840 LOC_Os09g17830 LOC_Os08g01100 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1440a |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g27450.1 |
| Rice Genome Annotation | LOC_Os07g27450.1 |
| Ricechip | LOC_Os07g27450.1 |
| KEGG | osa:4343156 dosa:Os07t0458700-01 |
| Entrez-Gene | 4343156 |