RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g27810.1 View Network Show in Genome Browser |
| Other Names | Os07g0462200 |
| Description | fiber protein Fb34, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 16226488-16230771 Nucleotide Length: 558 |
| Protein-coding | LOC_Os07g27810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g48900 LOC_Os05g02990 LOC_Os02g47450 LOC_Os06g36050 LOC_Os07g10770 LOC_Os03g12250 LOC_Os03g56380 LOC_Os03g57460 LOC_Os03g60340 LOC_Os01g16030 LOC_Os05g32110 More.. |
| Downstream Genes | LOC_Os09g36350 LOC_Os09g32080 LOC_Os08g35710 LOC_Os07g36110 LOC_Os07g43990 LOC_Os07g44350 LOC_Os08g34550 LOC_Os11g38010 LOC_Os12g01560 LOC_Os11g01570 LOC_Os07g44180 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g27810.1 |
| Rice Genome Annotation | LOC_Os07g27810.1 |
| Ricechip | LOC_Os07g27810.1 |
| KEGG | osa:4343166 dosa:Os07t0462200-01 |
| Entrez-Gene | 4343166 |