RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g28610.2 View Network Show in Genome Browser |
| Other Names | Os07g0469100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 16743567-16745510 Nucleotide Length: 453 |
| Protein-coding | LOC_Os07g28610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g56400 LOC_Os06g49160 LOC_Os05g01530 LOC_Os03g55720 LOC_Os02g49870 LOC_Os02g58790 LOC_Os02g38210 LOC_Os04g51300 LOC_Os03g14040 LOC_Os07g04840 LOC_Os03g03720 More.. |
| Downstream Genes | LOC_Os08g02630 LOC_Os07g32880 LOC_Os07g37240 LOC_Os07g37030 LOC_Os12g05430 LOC_Os10g41410 LOC_Os10g37180 LOC_Os09g30340 LOC_Os07g47640 LOC_Os12g08770 LOC_Os11g47760 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g28610.2 |
| Rice Genome Annotation | LOC_Os07g28610.2 |
| Ricechip | LOC_Os07g28610.2 |
| KEGG | osa:4343189 dosa:Os07t0469100-01 |
| Entrez-Gene | 4343189 |