RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g28820.1 View Network Show in Genome Browser |
| Other Names | Os07g0471000 |
| Description | ribonuclease 2-5A family protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 16870468-16875355 Nucleotide Length: 2682 |
| Protein-coding | LOC_Os07g28820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g48300 LOC_Os02g05630 LOC_Os06g33549 LOC_Os02g55560 LOC_Os04g56450 LOC_Os02g15594 LOC_Os04g52000 LOC_Os04g37904 LOC_Os06g44210 LOC_Os04g31270 LOC_Os06g33530 More.. |
| Downstream Genes | LOC_Os09g23690 LOC_Os07g32380 LOC_Os08g39150 LOC_Os10g39540 LOC_Os09g30100 LOC_Os09g32810 LOC_Os09g38550 LOC_Os08g27824 LOC_Os11g13820 LOC_Os12g33100 |
| Reference | |
|---|---|
| PubMed | 22199238 22050533 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g28820.1 |
| Rice Genome Annotation | LOC_Os07g28820.1 |
| Ricechip | LOC_Os07g28820.1 |
| KEGG | osa:4343198 dosa:Os07t0471000-01 |
| Entrez-Gene | 4343198 |