RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g28910.1 View Network Show in Genome Browser |
| Other Names | Os07g0472200 |
| Description | LSD1 zinc finger domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 16950091-16954807 Nucleotide Length: 444 |
| Protein-coding | LOC_Os07g28910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g26954 LOC_Os06g05870 LOC_Os03g49520 LOC_Os05g40410 LOC_Os01g20890 |
| Downstream Genes | LOC_Os09g03310 LOC_Os10g29274 LOC_Os08g41850 LOC_Os10g39900 LOC_Os11g47370 LOC_Os08g25864 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g28910.1 |
| Rice Genome Annotation | LOC_Os07g28910.1 |
| Ricechip | LOC_Os07g28910.1 |
| KEGG | osa:4343203 dosa:Os07t0472200-01 |
| Entrez-Gene | 4343203 |