RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g29220.1 View Network Show in Genome Browser |
| Other Names | Os07g0474600 |
| Description | Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 17115809-17120425 Nucleotide Length: 1398 |
| Protein-coding | LOC_Os07g29220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g05870 LOC_Os07g29200 LOC_Os02g10990 LOC_Os04g37920 LOC_Os02g41550 LOC_Os02g36380 LOC_Os06g45100 LOC_Os03g51150 LOC_Os03g50070 LOC_Os04g01510 |
| Downstream Genes | LOC_Os12g16650 LOC_Os10g08580 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-4942 PWY0-541 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g29220.1 |
| Rice Genome Annotation | LOC_Os07g29220.1 |
| Ricechip | LOC_Os07g29220.1 |
| KEGG | osa:4343210 dosa:Os07t0474600-01 |
| Entrez-Gene | 4343210 |