RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g29320.1 View Network Show in Genome Browser |
| Other Names | Os07g0475800 |
| Description | rRNA-processing protein EBP2, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 17195209-17196988 Nucleotide Length: 876 |
| Protein-coding | LOC_Os07g29320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22350 LOC_Os03g49210 LOC_Os04g43140 LOC_Os03g51900 LOC_Os07g20580 LOC_Os01g33050 LOC_Os05g48422 LOC_Os03g61560 LOC_Os03g22320 LOC_Os07g19190 LOC_Os02g37870 More.. |
| Downstream Genes | LOC_Os08g31810 LOC_Os10g35280 LOC_Os07g47580 LOC_Os12g04010 LOC_Os07g34740 LOC_Os11g04200 LOC_Os12g29660 LOC_Os11g01420 LOC_Os10g31520 LOC_Os10g10434 LOC_Os12g01430 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g29320.1 |
| Rice Genome Annotation | LOC_Os07g29320.1 |
| Ricechip | LOC_Os07g29320.1 |
| KEGG | osa:4343215 dosa:Os07t0475800-01 |
| Entrez-Gene | 4343215 |