RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g29330.5 View Network Show in Genome Browser |
| Other Names | Os07g0475900 |
| Description | serine/threonine-protein kinase CTR1, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 17204203-17209485 Nucleotide Length: 585 |
| Protein-coding | LOC_Os07g29330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os06g48300 LOC_Os02g55560 LOC_Os04g56450 LOC_Os06g33549 LOC_Os06g33530 LOC_Os06g44210 LOC_Os04g37904 LOC_Os02g15594 LOC_Os03g18150 LOC_Os04g52000 More.. |
| Downstream Genes | LOC_Os07g32380 LOC_Os10g39540 LOC_Os09g32810 LOC_Os09g30100 LOC_Os09g38550 LOC_Os09g13680 LOC_Os10g35470 LOC_Os10g27340 LOC_Os07g45074 LOC_Os10g36470 LOC_Os07g32590 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g29330.5 |
| Rice Genome Annotation | LOC_Os07g29330.5 |
| Ricechip | LOC_Os07g29330.5 |
| KEGG | osa:4343216 dosa:Os07t0475900-01 |
| Entrez-Gene | 4343216 |