RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g29390.1 View Network Show in Genome Browser |
| Other Names | Os07g0476500 |
| Description | peptidyl-prolyl cis-trans isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 17254909-17260585 Nucleotide Length: 708 |
| Protein-coding | LOC_Os07g29390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01090 LOC_Os01g02080 LOC_Os06g45910 LOC_Os03g04960 LOC_Os02g10970 LOC_Os03g58630 |
| Downstream Genes | LOC_Os08g29370 LOC_Os07g37830 LOC_Os10g32570 LOC_Os09g38420 LOC_Os11g38990 LOC_Os08g19610 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g29390.1 |
| Rice Genome Annotation | LOC_Os07g29390.1 |
| Ricechip | LOC_Os07g29390.1 |
| KEGG | osa:4343218 dosa:Os07t0476500-01 |
| Entrez-Gene | 4343218 |