RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g29410.1 View Network Show in Genome Browser |
| Other Names | Os07g0476900 |
| Description | thioredoxin, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 17268665-17270113 Nucleotide Length: 906 |
| Protein-coding | LOC_Os07g29410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02030 LOC_Os03g04590 LOC_Os02g56960 LOC_Os01g59060 LOC_Os05g19370 LOC_Os03g40180 LOC_Os02g52290 LOC_Os03g20700 LOC_Os04g52361 LOC_Os02g49470 LOC_Os04g58410 More.. |
| Downstream Genes | LOC_Os12g42870 LOC_Os10g32920 LOC_Os08g02630 LOC_Os07g46990 LOC_Os11g34940 LOC_Os10g35940 LOC_Os08g02410 LOC_Os10g36530 LOC_Os08g02400 LOC_Os07g46410 LOC_Os11g41610 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g29410.1 |
| Rice Genome Annotation | LOC_Os07g29410.1 |
| Ricechip | LOC_Os07g29410.1 |
| KEGG | osa:4343219 dosa:Os07t0476900-01 |
| Entrez-Gene | 4343219 |