RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g29420.3 View Network Show in Genome Browser |
| Other Names | Os07g0477000 |
| Description | DNA-directed RNA polymerase III subunit RPC8, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 17270515-17274278 Nucleotide Length: 609 |
| Protein-coding | LOC_Os07g29420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g28960 LOC_Os04g41490 LOC_Os01g59140 LOC_Os03g18410 LOC_Os07g27930 LOC_Os01g66580 LOC_Os03g38960 LOC_Os05g06490 LOC_Os06g48230 LOC_Os02g49180 LOC_Os04g41040 More.. |
| Downstream Genes | LOC_Os12g09280 LOC_Os07g42180 LOC_Os10g10434 LOC_Os08g16780 LOC_Os11g08940 LOC_Os12g39070 LOC_Os11g16540 LOC_Os08g42020 LOC_Os09g02284 LOC_Os10g29660 LOC_Os07g43330 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g29420.3 |
| Rice Genome Annotation | LOC_Os07g29420.3 |
| Ricechip | LOC_Os07g29420.3 |
| KEGG | osa:4343220 dosa:Os07t0477000-01 |
| Entrez-Gene | 4343220 |