RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g29600.1 View Network Show in Genome Browser |
| Other Names | Os07g0479100 |
| Description | zinc finger, C3HC4 type, domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 17399823-17403101 Nucleotide Length: 750 |
| Protein-coding | LOC_Os07g29600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g53890 LOC_Os03g60920 LOC_Os02g35060 LOC_Os06g06730 LOC_Os01g37560 |
| Downstream Genes | LOC_Os12g41830 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g29600.1 |
| Rice Genome Annotation | LOC_Os07g29600.1 |
| Ricechip | LOC_Os07g29600.1 |
| KEGG | osa:4343224 dosa:Os07t0479100-01 |
| Entrez-Gene | 4343224 |