RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g29620.1 View Network Show in Genome Browser |
| Other Names | Os07g0479300 |
| Description | OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 17410023-17413849 Nucleotide Length: 1575 |
| Protein-coding | LOC_Os07g29620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g44130 LOC_Os01g16900 LOC_Os02g10070 LOC_Os03g49180 LOC_Os03g60460 LOC_Os01g40280 LOC_Os02g03100 LOC_Os02g36960 LOC_Os05g25310 LOC_Os01g12800 LOC_Os03g53400 More.. |
| Downstream Genes | LOC_Os12g01160 LOC_Os11g01154 LOC_Os11g08300 LOC_Os11g33240 LOC_Os09g38030 LOC_Os10g37660 LOC_Os09g10820 LOC_Os12g43740 LOC_Os07g44430 LOC_Os10g32550 LOC_Os08g36320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g29620.1 |
| Rice Genome Annotation | LOC_Os07g29620.1 |
| Ricechip | LOC_Os07g29620.1 |
| KEGG | osa:4343226 dosa:Os07t0479300-01 |
| Entrez-Gene | 4343226 |