RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g29630.1 View Network Show in Genome Browser |
| Other Names | Os07g0479400 |
| Description | SNF7 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 17421301-17425456 Nucleotide Length: 690 |
| Protein-coding | LOC_Os07g29630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g01250 LOC_Os02g38300 LOC_Os06g40620 LOC_Os07g13270 LOC_Os01g18280 LOC_Os01g01350 LOC_Os01g31470 LOC_Os02g06490 LOC_Os01g04840 LOC_Os06g35814 LOC_Os01g23640 More.. |
| Downstream Genes | LOC_Os09g09480 LOC_Os12g02830 LOC_Os11g03060 LOC_Os11g47710 LOC_Os10g33660 LOC_Os10g33770 LOC_Os09g15790 LOC_Os10g27230 LOC_Os10g38950 LOC_Os08g06060 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g29630.1 |
| Rice Genome Annotation | LOC_Os07g29630.1 |
| Ricechip | LOC_Os07g29630.1 |
| KEGG | osa:4343227 dosa:Os07t0479400-01 |
| Entrez-Gene | 4343227 |