RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g29760.1 View Network Show in Genome Browser |
| Other Names | Os07g0480900 |
| Description | cysteine proteinase A494 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 17496502-17498225 Nucleotide Length: 1131 |
| Protein-coding | LOC_Os07g29760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g37910 LOC_Os03g53510 LOC_Os06g40620 LOC_Os03g48380 LOC_Os03g49210 LOC_Os03g10520 LOC_Os03g61070 |
| Downstream Genes | LOC_Os09g09480 LOC_Os12g37630 LOC_Os12g06620 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5833 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g29760.1 |
| Rice Genome Annotation | LOC_Os07g29760.1 |
| Ricechip | LOC_Os07g29760.1 |
| KEGG | osa:4343231 dosa:Os07t0480900-01 |
| Entrez-Gene | 4343231 |