RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g30100.2 View Network Show in Genome Browser |
| Other Names | Os07g0484300 |
| Description | RIN3, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 17744001-17755346 Nucleotide Length: 1347 |
| Protein-coding | LOC_Os07g30100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10750 LOC_Os06g36770 LOC_Os02g13110 LOC_Os04g46300 LOC_Os02g24612 LOC_Os01g41630 LOC_Os03g05730 LOC_Os01g46926 LOC_Os06g14510 LOC_Os03g56460 LOC_Os04g57220 More.. |
| Downstream Genes | LOC_Os10g07978 LOC_Os08g09430 LOC_Os10g30580 LOC_Os12g42850 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g30100.2 |
| Rice Genome Annotation | LOC_Os07g30100.2 |
| Ricechip | LOC_Os07g30100.2 |
| KEGG | osa:4343241 dosa:Os07t0484300-01 |
| Entrez-Gene | 4343241 |