RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g30670.2 View Network Show in Genome Browser |
| Other Names | Os07g0489800 |
| Description | 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 18149085-18150712 Nucleotide Length: 546 |
| Protein-coding | LOC_Os07g30670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14040 LOC_Os03g48040 LOC_Os03g45710 LOC_Os07g01930 LOC_Os03g61960 LOC_Os07g18120 LOC_Os03g57690 LOC_Os01g54540 LOC_Os03g50540 LOC_Os03g57680 LOC_Os05g01950 More.. |
| Downstream Genes | LOC_Os09g26810 LOC_Os09g10750 LOC_Os09g34140 LOC_Os09g33950 LOC_Os09g20440 LOC_Os08g25900 LOC_Os10g04860 LOC_Os07g34950 LOC_Os09g32988 LOC_Os11g27329 LOC_Os11g27264 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g30670.2 |
| Rice Genome Annotation | LOC_Os07g30670.2 |
| Ricechip | LOC_Os07g30670.2 |
| KEGG | osa:4343262 dosa:Os07t0489800-01 |
| Entrez-Gene | 4343262 |