RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os07g30800.1 View Network Show in Genome Browser
Other Names	Os07g0490400
Description	immunophilin, putative, expressed
Gene Attributes	Chromosome: Chr7 CDS Coordinates (5'-3'): 18228560-18232364 Nucleotide Length: 591
Protein-coding	LOC_Os07g30800

Gene Ontology Classification
GO	Name	Type	Code
GO:0016043	cellular component organization	Biological Process	IEA
GO:0006091	generation of precursor metabolites and energy	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0015979	photosynthesis	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA
GO:0009579	thylakoid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g02550 LOC_Os05g38370 LOC_Os03g25140 LOC_Os06g20320 LOC_Os03g61260 LOC_Os06g04530 LOC_Os02g43560 LOC_Os02g16709 LOC_Os02g58020 LOC_Os05g35540 LOC_Os02g02390 More..
Downstream Genes	LOC_Os11g41910 LOC_Os11g05090 LOC_Os12g05090 LOC_Os11g05552 LOC_Os11g02450 LOC_Os08g45010 LOC_Os09g39910 LOC_Os10g42700

miRNA Regulations
miRNAs	osa-miR390-3p osa-miR5144-5p

Database Links
Gramene	LOC_Os07g30800.1
Rice Genome Annotation	LOC_Os07g30800.1
Ricechip	LOC_Os07g30800.1
KEGG	osa:4343267 dosa:Os07t0490400-01
Entrez-Gene	4343267