RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g30810.1 View Network Show in Genome Browser |
| Other Names | Os07g0490500 |
| Description | nucleobase-ascorbate transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 18236236-18241475 Nucleotide Length: 2436 |
| Protein-coding | LOC_Os07g30810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g26840 LOC_Os05g44070 LOC_Os03g44560 LOC_Os06g42800 LOC_Os05g02820 LOC_Os01g51840 LOC_Os03g12250 LOC_Os03g14610 LOC_Os04g52370 LOC_Os03g28330 LOC_Os06g36050 More.. |
| Downstream Genes | LOC_Os11g24060 LOC_Os07g38490 LOC_Os07g44350 LOC_Os10g36060 LOC_Os12g28270 LOC_Os09g06499 LOC_Os08g31410 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g30810.1 |
| Rice Genome Annotation | LOC_Os07g30810.1 |
| Ricechip | LOC_Os07g30810.1 |
| KEGG | osa:4343268 dosa:Os07t0490500-01 |
| Entrez-Gene | 4343268 |