RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g30840.1 View Network Show in Genome Browser |
| Other Names | Os07g0490800 |
| Description | proteasome subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 18253474-18257977 Nucleotide Length: 789 |
| Protein-coding | LOC_Os07g30840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g12110 LOC_Os03g02540 LOC_Os04g40850 LOC_Os03g10120 LOC_Os01g03070 LOC_Os03g63430 LOC_Os07g07250 LOC_Os04g36700 LOC_Os02g05340 LOC_Os07g03230 LOC_Os01g32800 More.. |
| Downstream Genes | LOC_Os08g02550 LOC_Os07g32040 LOC_Os09g37000 LOC_Os09g21760 LOC_Os08g43640 LOC_Os12g18880 LOC_Os07g42950 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g30840.1 |
| Rice Genome Annotation | LOC_Os07g30840.1 |
| Ricechip | LOC_Os07g30840.1 |
| KEGG | osa:4343271 dosa:Os07t0490800-01 |
| Entrez-Gene | 4343271 |