RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g31270.1 View Network Show in Genome Browser |
| Other Names | Os07g0495000 |
| Description | cupin 2, conserved barrel domain protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 18509977-18515210 Nucleotide Length: 930 |
| Protein-coding | LOC_Os07g31270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g27320 |
| Downstream Genes | LOC_Os12g05050 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn01120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g31270.1 |
| Rice Genome Annotation | LOC_Os07g31270.1 |
| Ricechip | LOC_Os07g31270.1 |
| KEGG | osa:4343286 dosa:Os07t0495000-01 |
| Entrez-Gene | 4343286 |