RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g31300.1 View Network Show in Genome Browser |
| Other Names | Os07g0495200 |
| Description | ATP synthase delta chain, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 18532539-18535080 Nucleotide Length: 618 |
| Protein-coding | LOC_Os07g31300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g47980 LOC_Os01g49190 LOC_Os06g43850 LOC_Os06g02980 LOC_Os03g55874 LOC_Os06g39740 LOC_Os05g35320 LOC_Os03g48471 LOC_Os04g16740 LOC_Os01g08350 LOC_Os02g51470 More.. |
| Downstream Genes | LOC_Os09g08910 LOC_Os10g17280 LOC_Os12g10570 LOC_Os07g32880 LOC_Os10g21240 LOC_Os12g23630 LOC_Os09g08880 LOC_Os07g45090 LOC_Os07g42910 LOC_Os07g39710 LOC_Os07g44650 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn01100 rn00680 rn00190 rn00195 |
| Metacyc Pathways | PWY-6126 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g31300.1 |
| Rice Genome Annotation | LOC_Os07g31300.1 |
| Ricechip | LOC_Os07g31300.1 |
| KEGG | osa:4343288 dosa:Os07t0495200-01 |
| Entrez-Gene | 4343288 |