RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g31380.1 View Network Show in Genome Browser |
| Other Names | Os07g0496200 |
| Description | NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 18587314-18596123 Nucleotide Length: 1869 |
| Protein-coding | LOC_Os07g31380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g25439 LOC_Os03g02900 LOC_Os01g40470 LOC_Os03g51600 LOC_Os03g51140 LOC_Os03g45920 LOC_Os02g58020 |
| Downstream Genes | LOC_Os12g03720 LOC_Os11g14220 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00620 rn00710 rn01100 rn01120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g31380.1 |
| Rice Genome Annotation | LOC_Os07g31380.1 |
| Ricechip | LOC_Os07g31380.1 |
| KEGG | osa:4343294 dosa:Os07t0496200-01 |
| Entrez-Gene | 4343294 |