RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g31884.1 View Network Show in Genome Browser |
| Other Names | Os07g0502200 |
| Description | MATE efflux family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 18956322-18963235 Nucleotide Length: 1701 |
| Protein-coding | LOC_Os07g31884 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g62200 LOC_Os01g65000 LOC_Os02g34580 LOC_Os01g61510 LOC_Os05g39240 LOC_Os01g61550 LOC_Os03g61120 LOC_Os06g51060 LOC_Os04g35140 |
| Downstream Genes | LOC_Os12g01580 LOC_Os10g13940 LOC_Os09g37610 LOC_Os11g37950 LOC_Os12g01420 LOC_Os11g01410 LOC_Os11g37960 LOC_Os11g02100 LOC_Os10g38040 LOC_Os08g18044 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g31884.1 |
| Rice Genome Annotation | LOC_Os07g31884.1 |
| Ricechip | LOC_Os07g31884.1 |
| KEGG | osa:4343318 dosa:Os07t0502200-01 |
| Entrez-Gene | 4343318 |