RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g33100.1 View Network Show in Genome Browser |
| Other Names | Os07g0515000 |
| Description | uncharacterized ACR, COG1590 family protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 19762405-19768575 Nucleotide Length: 3132 |
| Protein-coding | LOC_Os07g33100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g41020 LOC_Os04g59010 LOC_Os02g15950 LOC_Os05g33040 LOC_Os04g46000 LOC_Os06g16290 LOC_Os02g49610 LOC_Os02g43550 LOC_Os06g35540 LOC_Os04g01970 LOC_Os05g46270 More.. |
| Downstream Genes | LOC_Os10g41430 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00130 rn01100 rn01110 rn00380 rn00624 rn01120 rn00340 rn00350 |
| Metacyc Pathways | PWY-702 PWY-5365 PWY-5133 PWY-5132 PWY-1422 PWY-4021 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g33100.1 |
| Rice Genome Annotation | LOC_Os07g33100.1 |
| Ricechip | LOC_Os07g33100.1 |
| KEGG | osa:4343372 dosa:Os07t0515000-01 |
| Entrez-Gene | 4343372 |