RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g33420.1 View Network Show in Genome Browser |
| Other Names | Os07g0517900 |
| Description | hydroxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 19975530-19981363 Nucleotide Length: 978 |
| Protein-coding | LOC_Os07g33420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0019825 | oxygen binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g25150 LOC_Os02g12550 LOC_Os02g12890 LOC_Os05g34380 LOC_Os03g39540 LOC_Os01g50530 LOC_Os01g11340 LOC_Os01g50590 LOC_Os02g29960 LOC_Os02g09200 |
| Downstream Genes | LOC_Os10g26340 LOC_Os08g01470 LOC_Os09g27510 LOC_Os11g28060 LOC_Os11g27730 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g33420.1 |
| Rice Genome Annotation | LOC_Os07g33420.1 |
| Ricechip | LOC_Os07g33420.1 |
| KEGG | osa:4343391 dosa:Os07t0517900-01 |
| Entrez-Gene | 4343391 |