RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g34520.2 View Network Show in Genome Browser |
| Other Names | Os07g0529000 |
| Description | isocitrate lyase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 20691054-20693694 Nucleotide Length: 1686 |
| Protein-coding | LOC_Os07g34520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g40990 LOC_Os04g42580 LOC_Os01g64660 LOC_Os05g36270 LOC_Os01g46070 LOC_Os05g49880 LOC_Os04g43650 LOC_Os03g20560 LOC_Os02g38980 LOC_Os02g13140 LOC_Os01g72940 More.. |
| Downstream Genes | LOC_Os11g41600 LOC_Os10g13700 LOC_Os07g38300 LOC_Os09g17850 LOC_Os07g48596 LOC_Os07g48550 LOC_Os10g28050 LOC_Os11g47574 LOC_Os07g42200 LOC_Os08g17400 LOC_Os07g48280 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g34520.2 |
| Rice Genome Annotation | LOC_Os07g34520.2 |
| Ricechip | LOC_Os07g34520.2 |
| KEGG | osa:4343441 dosa:Os07t0529000-01 |
| Entrez-Gene | 4343441 |