RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g35560.1 View Network Show in Genome Browser |
| Other Names | Os07g0539900 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 21280300-21282637 Nucleotide Length: 1809 |
| Protein-coding | LOC_Os07g35560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g71350 LOC_Os01g51570 LOC_Os04g52190 LOC_Os01g71340 LOC_Os07g35370 LOC_Os04g59150 LOC_Os07g35390 LOC_Os05g46330 LOC_Os06g08380 LOC_Os01g55040 LOC_Os07g08330 More.. |
| Downstream Genes | LOC_Os09g36440 LOC_Os10g22570 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1848 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g35560.1 |
| Rice Genome Annotation | LOC_Os07g35560.1 |
| Ricechip | LOC_Os07g35560.1 |
| KEGG | osa:4343492 dosa:Os07t0539900-01 |
| Entrez-Gene | 4343492 |