RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g35580.1 View Network Show in Genome Browser |
| Other Names | Os07g0540100 |
| Description | TKL_IRAK_DUF26-lc.20 - DUF26 kinases have homology to DUF26 containing loci, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 21295196-21299576 Nucleotide Length: 2091 |
| Protein-coding | LOC_Os07g35580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os06g48300 LOC_Os06g33549 LOC_Os02g15594 LOC_Os07g11010 LOC_Os02g55560 LOC_Os03g59530 LOC_Os03g01180 LOC_Os07g32380 LOC_Os04g37904 LOC_Os04g56450 More.. |
| Downstream Genes | LOC_Os10g39540 LOC_Os09g22450 LOC_Os09g20090 LOC_Os09g27830 LOC_Os11g37920 LOC_Os08g17680 LOC_Os09g29370 LOC_Os11g38780 LOC_Os09g19734 LOC_Os10g27340 LOC_Os11g09010 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g35580.1 |
| Rice Genome Annotation | LOC_Os07g35580.1 |
| Ricechip | LOC_Os07g35580.1 |
| KEGG | osa:4343493 dosa:Os07t0540100-01 |
| Entrez-Gene | 4343493 |