RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g36080.1 View Network Show in Genome Browser |
| Other Names | Os07g0544800 |
| Description | oxygen evolving enhancer protein 3 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 21574435-21576033 Nucleotide Length: 654 |
| Protein-coding | LOC_Os07g36080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g48630 LOC_Os07g04840 LOC_Os04g33830 LOC_Os03g03860 LOC_Os07g25430 LOC_Os04g38600 LOC_Os06g21210 LOC_Os01g31690 LOC_Os03g55720 LOC_Os04g38410 LOC_Os03g22370 More.. |
| Downstream Genes | LOC_Os08g02630 LOC_Os09g30340 LOC_Os11g47970 LOC_Os08g01380 LOC_Os08g33820 LOC_Os12g19470 LOC_Os12g19381 LOC_Os11g13890 LOC_Os11g07020 LOC_Os07g37030 LOC_Os12g07210 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g36080.1 |
| Rice Genome Annotation | LOC_Os07g36080.1 |
| Ricechip | LOC_Os07g36080.1 |
| KEGG | osa:4343515 dosa:Os07t0544800-01 |
| Entrez-Gene | 4343515 |