RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g36470.1 View Network Show in Genome Browser |
| Other Names | Os07g0549700 |
| Description | vacuolar ATP synthase subunit H, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 21819387-21822388 Nucleotide Length: 948 |
| Protein-coding | LOC_Os07g36470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g45120 LOC_Os02g07870 LOC_Os02g57854 LOC_Os01g46980 LOC_Os06g37180 LOC_Os04g55040 LOC_Os01g51380 LOC_Os05g01560 LOC_Os01g57930 LOC_Os02g34510 LOC_Os01g12260 More.. |
| Downstream Genes | LOC_Os11g06890 LOC_Os10g10500 LOC_Os09g34040 LOC_Os08g45010 LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 LOC_Os09g39910 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g36470.1 |
| Rice Genome Annotation | LOC_Os07g36470.1 |
| Ricechip | LOC_Os07g36470.1 |
| KEGG | osa:9272111 dosa:Os07t0549700-01 |
| Entrez-Gene | 9272111 |