RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g36940.1 View Network Show in Genome Browser |
| Other Names | Os07g0555200 |
| Description | eukaryotic translation initiation factor 4G, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 22114961-22123129 Nucleotide Length: 5379 |
| Protein-coding | LOC_Os07g36940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g48750 LOC_Os02g05330 LOC_Os01g73880 LOC_Os03g22570 LOC_Os05g05450 LOC_Os03g56800 LOC_Os02g42040 LOC_Os02g39890 LOC_Os02g56740 LOC_Os07g08660 LOC_Os07g10720 More.. |
| Downstream Genes | LOC_Os09g02700 LOC_Os12g15420 LOC_Os08g22354 LOC_Os08g13690 LOC_Os10g41960 LOC_Os09g15770 LOC_Os12g03880 LOC_Os10g41470 LOC_Os12g38000 LOC_Os11g04070 LOC_Os08g03640 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5836 osa-miR5834 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g36940.1 |
| Rice Genome Annotation | LOC_Os07g36940.1 |
| Ricechip | LOC_Os07g36940.1 |
| KEGG | osa:4343565 dosa:Os07t0555200-01 |
| Entrez-Gene | 4343565 |