RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g37040.1 View Network Show in Genome Browser |
| Other Names | Os07g0556300 |
| Description | PB1 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 22187290-22189082 Nucleotide Length: 1137 |
| Protein-coding | LOC_Os07g37040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g04440 LOC_Os01g69900 LOC_Os03g03900 LOC_Os01g13540 LOC_Os01g72950 LOC_Os02g27030 LOC_Os03g02640 LOC_Os03g41080 LOC_Os07g06660 LOC_Os01g01160 LOC_Os04g53740 More.. |
| Downstream Genes | LOC_Os09g38390 LOC_Os09g04990 LOC_Os12g07190 LOC_Os11g16290 LOC_Os09g37710 LOC_Os12g43660 LOC_Os10g10500 LOC_Os08g40930 LOC_Os08g45190 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g37040.1 |
| Rice Genome Annotation | LOC_Os07g37040.1 |
| Ricechip | LOC_Os07g37040.1 |
| KEGG | osa:4343571 dosa:Os07t0556300-01 |
| Entrez-Gene | 4343571 |