RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g37130.3 View Network Show in Genome Browser |
| Other Names | Os07g0557400 |
| Description | FUR1, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 22243925-22246490 Nucleotide Length: 612 |
| Protein-coding | LOC_Os07g37130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g05640 LOC_Os07g16950 LOC_Os06g36990 LOC_Os02g53680 LOC_Os03g07080 LOC_Os06g07960 LOC_Os06g07860 LOC_Os01g57110 LOC_Os01g52500 |
| Downstream Genes | LOC_Os09g07510 LOC_Os10g27230 LOC_Os08g05840 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR160a-3p osa-miR160b-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g37130.3 |
| Rice Genome Annotation | LOC_Os07g37130.3 |
| Ricechip | LOC_Os07g37130.3 |
| KEGG | osa:4343575 dosa:Os07t0557400-01 |
| Entrez-Gene | 4343575 |